doc. Mgr. David Bednář, Ph.D.

2022

• SoluProtMutDB: A manually curated database of protein solubility changes upon mutations

  VELECKÝ Jan HAMŠÍKOVÁ Marie ŠTOURAČ Jan MUSIL Miloš DAMBORSKÝ Jiří BEDNÁŘ David MAZURENKO Stanislav

  Article in Periodical

  Computational and Structural Biotechnology Journal, year: 2022, volume: 20, edition: November 2022, DOI

• Structural Insights into (Tere)phthalate-Ester Hydrolysis by a Carboxylesterase and Its Role in Promoting PET Depolymerization

  VON HAUGWITZ Gerlis HAN Xu PFAFF Lara LI Qian WEI Hongli GAO Jian METHLING Karen AO Yufei BRACK Yannik MIČAN Jan FEILER Christian G WEISS Manfred S BEDNÁŘ David PALM Gottfried J. LALK Michael LAMMERS Michael DAMBORSKÝ Jiří WEBER Gert LIU Weidong BORNSCHEUER Uwe T. WEI Ren

  Article in Periodical

  ACS Catalysis, year: 2022, volume: 12, edition: 24, DOI

• Tools for computational design and high-throughput screening of therapeutic enzymes

  VAŠINA Michal VELECKÝ Jan PLANAS IGLESIAS Joan MARQUES Sérgio Manuel ŠKAŘUPOVÁ Jana DAMBORSKÝ Jiří BEDNÁŘ David MAZURENKO Stanislav PROKOP Zbyněk

  Article in Periodical

  ADVANCED DRUG DELIVERY REVIEWS, year: 2022, volume: 183, edition: April 2022, DOI

• Virtual screening of potential anticancer drugs based on microbial products

  RANGEL PAMPLONA PIZARRO PINTO José Gaspar HENDRIKSE Natalie M. ŠTOURAČ Jan DAMBORSKÝ Jiří BEDNÁŘ David

  Article in Periodical

  Seminars in Cancer Biology, year: 2022, volume: 86, edition: November 2022, DOI

• 熱安定性ＦＧＦ２ポリペプチド及びその使用

  DVOŘÁK Petr KREJČÍ Pavel BÁLEK Lukáš EISELLEOVÁ Lívia KONEČNÁ Žaneta DVOŘÁK Pavel BEDNÁŘ David BREZOVSKÝ Jan ŠEBESTOVÁ Eva CHALOUPKOVÁ Radka ŠTĚPÁNKOVÁ Veronika VAŇÁČEK Pavel PROKOP Zbyněk DAMBORSKÝ Jiří BOSÁKOVÁ Michaela

  Patent

  Publisher: Japan Patent Office (JPO), state: Japan, patent's number: JP7131772, year: 2022

2021

• Computational design of enzymes for biotechnological applications

  PLANAS IGLESIAS Joan MARQUES Sérgio Manuel RANGEL PAMPLONA PIZARRO PINTO José Gaspar MUSIL Miloš ŠTOURAČ Jan DAMBORSKÝ Jiří BEDNÁŘ David

  Article in Periodical

  Biotechnology Advances, year: 2021, volume: 47, edition: March–April, DOI

• Computational enzyme design for metabolic engineering

  DAMBORSKÝ Jiří BEDNÁŘ David PROKOP Zbyněk MAREK Martin MAZURENKO Stanislav ŠTOURAČ Jan MARQUES Sérgio Manuel FONSECA PINTO Gabriela Filipa PLANAS IGLESIAS Joan MUSIL Miloš HON Jiří VÁVRA Ondřej KHAN Rayyan Tariq FILIPOVIČ Jiří KOZLÍKOVÁ Barbora

  Conference abstract

  Year: 2021, type: Conference abstract

• Computational Enzyme Stabilization Can Affect Folding Energy Landscapes and Lead to Catalytically Enhanced Domain-Swapped Dimers

  MARKOVÁ Klára KUNKA Antonín CHMELOVÁ Klaudia HAVLÁSEK Martin BABKOVÁ Petra MARQUES Sérgio Manuel VAŠINA Michal PLANAS IGLESIAS Joan CHALOUPKOVÁ Radka BEDNÁŘ David PROKOP Zbyněk DAMBORSKÝ Jiří MAREK Martin

  Article in Periodical

  ACS Catalysis, year: 2021, volume: 11, edition: 21, DOI

• Designované a syntetizované geny kódující nově zkonstruované proteinové katalyzátory (luciferázy) s ověřenými vlastnostmi

  MAREK Martin DAMBORSKÝ Jiří BEDNÁŘ David PLUSKAL Daniel MAJEROVÁ Marika PLANAS IGLESIAS Joan

  Outcomes put into operation (prototype, working sample)

  Year: 2021

• Engineering protein dynamics for the understanding of divergent evolution of the Renilla luciferase

  TOUL Martin SMITH Andrea RANGEL PAMPLONA PIZARRO PINTO José Gaspar MAREK Martin HERNYCHOVÁ Lenka LIŠKOVÁ Veronika PLUSKAL Daniel EMOND Stephane DÖRR Mark PLANAS IGLESIAS Joan CHALOUPKOVÁ Radka BEDNÁŘ David PROKOP Zbyněk BORNSCHEUER Uwe T. HOLLFELDER Florian DAMBORSKÝ Jiří

  Conference abstract

  Year: 2021, type: Conference abstract