doc. Mgr. David Bednář, Ph.D.

2021

• FireProt(DB): database of manually curated protein stability data

  ŠTOURAČ Jan DUBRAVA Juraj MUSIL Miloš HORÁČKOVÁ Jana DAMBORSKÝ Jiří MAZURENKO Stanislav BEDNÁŘ David

  Peer-reviewed scientific article

  Nucleic acids research, year: 2021, volume: 49, edition: D1, DOI

• Promiscuous Dehalogenase Activity of the Epoxide Hydrolase CorEH from Corynebacterium sp. C12

  SCHUITEN Eva D. BADENHORST Christoffel P. S. PALM Gottfried J. BERNDT Leona LAMMERS Michael MIČAN Jan BEDNÁŘ David DAMBORSKÝ Jiří BORNSCHEUER Uwe T.

  Peer-reviewed scientific article

  ACS Catalysis, year: 2021, volume: 11, edition: 10, DOI

• Screening of Natural Compounds as P-Glycoprotein Inhibitors against Multidrug Resistance

  MARQUES Sérgio Manuel ŠUPOLÍKOVÁ Lucie MOLČANOVÁ Lenka ŠMEJKAL Karel BEDNÁŘ David SLANINOVÁ Iva

  Peer-reviewed scientific article

  BIOMEDICINES, year: 2021, volume: 9, edition: 4, DOI

• Simulation of Ligand Transport in Receptors Using CaverDock

  HOZZOVÁ Jana VÁVRA Ondřej BEDNÁŘ David FILIPOVIČ Jiří

  Chapter in a book

  Protein-Ligand Interactions and Drug Design, year: 2021, number of pages: 20 s., DOI

• Thermostable FGF2 Polypeptide, Use Thereof

  DVOŘÁK Petr KREJČÍ Pavel BÁLEK Lukáš EISELLEOVÁ Lívia KONEČNÁ Žaneta DVOŘÁK Pavel BEDNÁŘ David BREZOVSKÝ Jan ŠEBESTOVÁ Eva CHALOUPKOVÁ Radka ŠTĚPÁNKOVÁ Veronika VAŇÁČEK Pavel PROKOP Zbyněk DAMBORSKÝ Jiří BOSÁKOVÁ Michaela

  Patent

  Publisher: Intellectual Property Office of Singapore (IPOS), state: Singapore, patent's number: SG11201804402W, year: 2021

2020

• A Haloalkane Dehalogenase from Saccharomonospora viridis Strain DSM 43017, a Compost Bacterium with Unusual Catalytic Residues, Unique (S)-Enantiopreference, and High Thermostability

  CHMELOVÁ Klaudia ŠEBESTOVÁ Eva LIŠKOVÁ Veronika BEIER Andy BEDNÁŘ David PROKOP Zbyněk CHALOUPKOVÁ Radka DAMBORSKÝ Jiří

  Peer-reviewed scientific article

  Applied and Environmental Microbiology, year: 2020, volume: 86, edition: 17, DOI

• Decoding the intricate network of molecular interactions of a hyperstable engineered biocatalyst

  MARKOVÁ Klára CHMELOVÁ Klaudia MARQUES Sérgio Manuel CARPENTIER Philippe BEDNÁŘ David DAMBORSKÝ Jiří MAREK Martin

  Peer-reviewed scientific article

  Chemical Science, year: 2020, volume: 11, edition: 41, DOI

• EnzymeMiner: automated mining of soluble enzymes with diverse structures, catalytic properties and stabilities

  HON Jiří BORKO Simeon ŠTOURAČ Jan PROKOP Zbyněk ZENDULKA Jaroslav BEDNÁŘ David MARTINEK Tomas DAMBORSKÝ Jiří

  Peer-reviewed scientific article

  Nucleic acids research, year: 2020, volume: 48, edition: W1, DOI

• Structures of hyperstable ancestral haloalkane dehalogenases show restricted conformational dynamics

  BABKOVÁ Petra DUNAJOVÁ Zuzana CHALOUPKOVÁ Radka DAMBORSKÝ Jiří BEDNÁŘ David MAREK Martin

  Peer-reviewed scientific article

  Computational and Structural Biotechnology Journal, year: 2020, volume: 18, edition: 2020, DOI

• The impact of tunnel mutations on enzymatic catalysis depends on the tunnel-substrate complementarity and the rate-limiting step

  KOKKONEN Piia Pauliina SLÁNSKÁ Michaela DOČKALOVÁ Veronika RANGEL PAMPLONA PIZARRO PINTO José Gaspar MARQUEZ SANCHEZ - CARNERERO Esther Maria DAMBORSKÝ Jiří KLÁN Petr PROKOP Zbyněk BEDNÁŘ David

  Peer-reviewed scientific article

  Computational and Structural Biotechnology Journal, year: 2020, volume: 18, edition: 2020, DOI