doc. Mgr. David Bednář, Ph.D.

2023

• sMolBoxes: Dataflow Model for Molecular Dynamics Exploration

  ULBRICH Pavol WALDNER Manuela FURMANOVÁ Katarína MARQUES Sérgio Manuel BEDNÁŘ David KOZLÍKOVÁ Barbora BYŠKA Jan

  Peer-reviewed scientific article

  IEEE Transactions on Visualization and Computer Graphics, year: 2023, volume: 29, edition: 1, DOI

2022

• Caver Web 1.2

  MUSIL Miloš JEŽÍK Andrej HAMŠÍKOVÁ Marie ŠTOURAČ Jan GALGONEK Jakub VONDÁŠEK jiří BEDNÁŘ David DAMBORSKÝ Jiří

  Software

  Year: 2022

• DESIGN AND SYNTHESIS OF N-HYDROXY-CINNAMAMIDE DERIVATES AS NOVEL HDAC INHIBITORS: EVALUATION OF BIOLOGICAL ACTIVITY IN CANCER CELLS

  ONUŠČÁKOVÁ Magdaléna PÍŽOVÁ Hana KAUEROVÁ Tereza HAMŠÍKOVÁ Marie BEDNÁŘ David KOLLÁR Peter BOBÁĽ Pavel

  Paper in proceedings

  Czech Chemical Society Symposium Series, year: 2022

• Follistatin-like 1 and its paralogs in heart development and cardiovascular disease

  HOŘÁK Martin FAIRWEATHER DeLisa KOKKONEN Piia Pauliina BEDNÁŘ David DOBROVOLNÁ Julie

  Peer-reviewed scientific article

  Heart Failure Reviews, year: 2022, volume: 27, edition: 6, DOI

• Fully automated virtual screening pipeline of FDA-approved drugs using Caver Web

  MUSIL Miloš JEŽÍK Andrej HAMŠÍKOVÁ Marie ŠTOURAČ Jan GALGONEK Jakub EYRILMEZ Saltuk Mustafa VONDRASEK Jiri DAMBORSKÝ Jiří BEDNÁŘ David

  Peer-reviewed scientific article

  Computational and Structural Biotechnology Journal, year: 2022, volume: 20, edition: November 2022, DOI

• Mechanism-Based Strategy for Optimizing HaloTag Protein Labeling

  MARQUES Sérgio Manuel SLÁNSKÁ Michaela CHMELOVÁ Klaudia CHALOUPKOVÁ Radka MAREK Martin CLARK Spencer DAMBORSKÝ Jiří KOOL Eric T. BEDNÁŘ David PROKOP Zbyněk

  Peer-reviewed scientific article

  JACS AU, year: 2022, volume: 2, edition: 6, DOI

• PredictSNP Onco 1.0

  ŠTOURAČ Jan KHAN Rayyan Tariq BORKO Simeon POKORNÁ Petra DOBIÁŠ Adam RANGEL PAMPLONA PIZARRO PINTO José Gaspar ŠTĚRBA Jaroslav SLABÝ Ondřej DAMBORSKÝ Jiří BEDNÁŘ David

  Software

  Year: 2022

• SoluProtMutDB: A manually curated database of protein solubility changes upon mutations

  VELECKÝ Jan HAMŠÍKOVÁ Marie ŠTOURAČ Jan MUSIL Miloš DAMBORSKÝ Jiří BEDNÁŘ David MAZURENKO Stanislav

  Peer-reviewed scientific article

  Computational and Structural Biotechnology Journal, year: 2022, volume: 20, edition: November 2022, DOI

• Structural Insights into (Tere)phthalate-Ester Hydrolysis by a Carboxylesterase and Its Role in Promoting PET Depolymerization

  VON HAUGWITZ Gerlis HAN Xu PFAFF Lara LI Qian WEI Hongli GAO Jian METHLING Karen AO Yufei BRACK Yannik MIČAN Jan FEILER Christian G WEISS Manfred S BEDNÁŘ David PALM Gottfried J. LALK Michael LAMMERS Michael DAMBORSKÝ Jiří WEBER Gert LIU Weidong BORNSCHEUER Uwe T. WEI Ren

  Peer-reviewed scientific article

  ACS Catalysis, year: 2022, volume: 12, edition: 24, DOI

• Virtual screening of potential anticancer drugs based on microbial products

  RANGEL PAMPLONA PIZARRO PINTO José Gaspar HENDRIKSE Natalie M. ŠTOURAČ Jan DAMBORSKÝ Jiří BEDNÁŘ David

  Peer-reviewed scientific article

  Seminars in Cancer Biology, year: 2022, volume: 86, edition: November 2022, DOI