Project information
Structure, function and regulation of FerB, a broad-specificity bacterial oxidoreductase of a potential ecotechnological relevance
- Project Identification
- GA525/07/1069
- Project Period
- 1/2007 - 12/2009
- Investor / Pogramme / Project type
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Czech Science Foundation
- Standard Projects
- MU Faculty or unit
- Faculty of Science
- Keywords
- NAD(P)H:acceptor oxidoreductase, flavin, chromate, bioremediation, Paracoccus denitrificans
The FerB enzyme of Paracoccus denitrificans was originally discovered by our group as an NAD(P)H-dependent oxidoreductase able to reduce ferric complexes, quinones and chromate. Given the potential of using FerB for bioremediation of chromium(VI) and possibly also other heavy metals, we now propose to undertake a systematic investigation of this enzyme by conventional biochemistry, structural and molecularbiology. The gene encoding FerB will be amplified and cloned based on 27 known N-terminal amino acid residues of the protein and the already published P. denitrificans whole genome sequence. Heterologous expression of the ferB gene is expected to yield large quantities of pure recombinant protein for studies on substrate specificity, stoichiometry of electron transfer and redox kinetics of the bound flavin coenzyme. Trials will also set out to crystallise FerB and collect diffraction data for structural analysis. Suicide vectors and triparental mating will serve for construction of mutant strains lacking FerB and reporter strains carrying ferB promoter fused to the gene for β-galactosidase. Behaviour of these strains under a variety of growth conditions should provide important information on biological functions of FerB and regulation of its activity within the cell.
Publications
Total number of publications: 8
2010
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Crystallization and initial X-ray diffraction studies of the flavoenzyme NAD(P)H:(acceptor) oxidoreductase (FerB) from the soil bacterium Paracoccus denitrificans
Acta crystallographica. Section F Structural biology and crystallization communications, year: 2010, volume: F66, edition: 4
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Chromate reductase activity of the Paracoccus denitrificans ferric reductase B (FerB) protein and its physiological relevance
Archives of microbiology, year: 2010, volume: 192, edition: 11
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SOLVING PHASE PROBLEM USING A SE-MET DERIVATIVE OF THE FLAVOENZYME NAD(P)H:ACCEPTOR OXIDOREDUCTASE (FERB)
Materials Structure, vol. 17, no. 1a (2010), year: 2010
2009
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Ferric reductase A is essential for effective iron acquisition in Paracoccus denitrificans.
Microbiology-SGM, year: 2009, volume: 155, edition: 4
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Heterologous expression and molecular characterization of the NAD(P)H:acceptor oxidoreductase (FerB) of Paracoccus denitrificans
Protein Expression and Purification, year: 2009, volume: 68, edition: 2
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Characterization of the quinone reductase activity of the ferric reductase B protein from Paracoccus denitrificans
Archives of biochemistry and biophysics, year: 2009, volume: 483, edition: 1
2008
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FerA from Paracoccus denitrificans participates in iron utilization.
Year: 2008, type: Conference abstract
2007
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Effect of ferB mutation on the sensitivity of Paracoccus denitrificans to quinones
FEBS Journal Supplement 32nd FEBS Congress Abstracts, year: 2007