Molecular Modelling and Bioinformatics

Articles

• Accessible biocatalyst development by rapid in vitro semi-rational engineering (RISE) of enzymes

  TELEK Andras GAJAK Viktor Zsolt DARGO Gergo MIČAN Jan BEDNÁŘ David VERTESSY Beata G. TASNADI Gabor

  Peer-reviewed scientific article

  iScience, year: 2026, volume: 29, edition: 1, DOI

• EnzymeMiner 2.0: advancing automated enzyme discovery with expansive sequence mining and smart property analysis

  ROSINSKÁ Monika SVOBODOVA Lucie BORKO Simeon LACKO Dávid PLANAS IGLESIAS Joan MARQUES Sérgio Manuel KABOUREK Petr LIU Baoyan PAILOZIAN Karen DAMBORSKÝ Jiří MAZURENKO Stanislav BEDNÁŘ David

  Peer-reviewed scientific article

  Nucleic acids research, year: 2026, volume: 54, edition: W1, DOI

• Experimentally validated deep learning control of protein aggregation

  CIMA Vojtech KUNKA Antonín PLANAS IGLESIAS Joan GRAKOVA Ekaterina HAVLÁSEK Martin SUBRAMANIAN Madhumalar BELOCH Michal MAREK Martin SLANINOVA Katerina DAMBORSKÝ Jiří PROKOP Zbyněk BEDNÁŘ David MARTINOVIC Jan

  Peer-reviewed scientific article

  Communications Chemistry, year: 2026, volume: 9, edition: 1, DOI

• FireProtDB 2.0: large-scale manually curated database of the protein stability data

  MUSIL Miloš BORKO Simeon PLANAS IGLESIAS Joan LACKO Dávid ROSINSKA Monika KABOUREK Petr MARTINS Ligia O. TATARUCH Mateusz DAMBORSKÝ Jiří MAZURENKO Stanislav BEDNÁŘ David

  Peer-reviewed scientific article

  NUCLEIC ACIDS RESEARCH, year: 2026, volume: 54, edition: D1, DOI

• Harmane inhibits hepatic cytochrome P450 enzymes in rats

  KLÁSKOVÁ Eva ZENDULKA Ondřej PEŠ Ondřej EYRILMEZ Saltuk Mustafa BEDNÁŘ David JUŘICA Jan

  Peer-reviewed scientific article

  Frontiers in Pharmacology, year: 2026, volume: 17, edition: August 2026, DOI

• Molecular trick to reverse SN2 step in a haloalkane dehalogenase

  TOUL Martin MARQUES Sérgio Manuel GAO Tadeja BERNHARDOVÁ Hana VÁVRA Ondřej NOVÁKOVÁ Veronika DAMBORSKÝ Jiří BEDNÁŘ David PROKOP Zbyněk MAREK Martin

  Peer-reviewed scientific article

  Chem Catalysis, year: 2026, volume: 6, edition: 5, DOI

• Structural insights into the evolution of alpha/beta-hydrolase fold luciferases

  MAJEROVÁ Marika HORÁČKOVÁ Jana SEDLÁČKOVÁ Karolina ŠULOVÁ Marie KOVÁŘ David DAMBORSKÝ Jiří PROKOP Zbyněk BEDNÁŘ David MAREK Martin

  Peer-reviewed scientific article

  International journal of biological macromolecules, year: 2026, volume: 361, edition: May 2026, DOI

• The effect of salidroside, an active component of Rhodiola rosea, on the metabolic activity of rat and human cytochromes P450 in preclinical studies

  KLÁSKOVÁ Eva JUŘICA Jan DANEK Przemyslaw Jan MLČŮCHOVÁ Natálie EYRILMEZ Saltuk Mustafa BOŘILOVÁ LINHARTOVÁ Petra BEDNÁŘ David KAMARAJ Rajamanikkam DANIEL Wladyslawa Anna ZENDULKA Ondřej

  Peer-reviewed scientific article

  Pharmacological Reports, year: 2026, volume: 78, edition: 3, DOI