RNDr. Tomáš Raček, Ph.D.

Deputy Core Facility Leader, Biological Data Management and Analysis Core Facility

Correspondence Address:
Kotlářská 267/2, 611 37 Brno

Office: bldg. C04/234
Kamenice 753/5
625 00 Brno

Phone:	+420 549 49 6568
E‑mail:

social and academic networks:

Basic information

Supervision

Qualifications

Publications

Type

Total number of publications: 36

2024

ChannelsDB 2.0: a comprehensive database of protein tunnels and pores in AlphaFold era

ŠPAČKOVÁ Anna VÁVRA Ondřej RAČEK Tomáš BAZGIER Václav SEHNAL David DAMBORSKÝ Jiří SVOBODOVÁ Radka BEDNÁŘ David BERKA Karel

Article in Periodical

Nucleic Acids Research, year: 2024, volume: 52, edition: D1, DOI

2023

An Evaluation of EDAM Coverage in the Tools Ecosystem and Prototype Integration of Galaxy and Workflowhub Systems.

LAMOTHE Lucie JENSEN Jennifer R B IENASESCU Hans GUSTAFSSON Ove J R GAIGNARD Alban REPCHEVSKY Dmitry SVOBODOVÁ Radka RAČEK Tomáš ROŠINEC Adrián ANTOL Matej MÉNAGER Hervé

Article in Periodical (without peer review)

Year: 2023, type: Article in Periodical (without peer review)
Enhancing Data Accessibility: Strategies and Tools for Effective Metadata Management

ROŠINEC Adrián SVOBODA Tomáš RAČEK Tomáš KŘENEK Aleš SVOBODOVÁ Radka

Appeared in Conference without Proceedings

Year: 2023, type: Appeared in Conference without Proceedings
ChannelsDB 2.0: A Comprehensive Database of Protein Tunnels and Pores in AlphaFold Era

ŠPAČKOVÁ Anna VÁVRA Ondřej RAČEK Tomáš BAZGIER Václav SEHNAL David DAMBORSKÝ Jiří SVOBODOVÁ Radka BERKA Karel

Conference abstract

Year: 2023, type: Conference abstract
Management of life-science data and their metadata

RAČEK Tomáš SVOBODA Tomáš SVOBODOVÁ Radka

Appeared in Conference without Proceedings

Year: 2023, type: Appeared in Conference without Proceedings
New ways of protein family visualization in AlphaFold era

SVOBODOVÁ Radka BERKA Karel HUTAŘOVÁ VAŘEKOVÁ Ivana RAČEK Tomáš SCHINDLER Ondřej

Appeared in Conference without Proceedings

Year: 2023, type: Appeared in Conference without Proceedings
Onedata4Sci: Life-science experimental datasets management system

ROŠINEC Adrián SVOBODA Tomáš RAČEK Tomáš HANDL Josef SABO Jozef KŘENEK Aleš SVOBODOVÁ Radka

Conference abstract

Year: 2023, type: Conference abstract
Zpracování dat na CEITECu

RAČEK Tomáš

Year: 2023, type:
αCharges: partial atomic charges for AlphaFold structures in high quality

SCHINDLER Ondřej BERKA Karel CANTARA Alessio KŘENEK Aleš TICHÝ Dominik RAČEK Tomáš SVOBODOVÁ Radka

Article in Periodical

Nucleic Acids Research, year: 2023, volume: 51, edition: W1, DOI

2022

Alphacharges - a web service for calculating QM-like partial atomic charges for AlphaFold proteins

SCHINDLER Ondřej RAČEK Tomáš SVOBODOVÁ Radka

Appeared in Conference without Proceedings

Year: 2022, type: Appeared in Conference without Proceedings

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