prof. RNDr. Jiří Šponer, DrSc.

2016

• Non-Enzymatic Oligomerization of 3 ', 5 ' Cyclic AMP

  COSTANZO Giovanna PINO Samanta TIMPERIO Anna Maria ŠPONEROVÁ Judit ŠPONER Jiří NOVAKOVA Olga ŠEDO Ondrej ZDRÁHAL Zbyněk DI MAURO Ernesto

  Article in Periodical

  Plos one, year: 2016, volume: 11, edition: 11, DOI

• On the Use of Molecular Dynamics Simulations for Probing Allostery through DNA

  DRŠATA Tomáš ZGARBOVÁ Marie JUREČKA Petr ŠPONER Jiří LANKAŠ Filip

  Article in Periodical

  Biophysical Journal, year: 2016, volume: 110, edition: 4, DOI

• Photorelaxation of imidazole and adenine via electron-driven proton transfer along H2O wires

  SZABLA Rafal GORA Robert W. JANICKI Mikolaj ŠPONER Jiří

  Article in Periodical

  FARADAY DISCUSSIONS, year: 2016, volume: 195, edition: 2016, DOI

• Prebiotic synthesis of nucleic acids and their building blocks at the atomic level - merging models and mechanisms from advanced computations and experiments

  ŠPONEROVÁ Judit SZABLA Rafal Kazimierz GORA Robert W. SAITTA A. Marco PIETRUCCI Fabio SAIJA Franz DI MAURO Ernesto SALADINO Raffaele FERUS Martin CIVIŠ Svatopluk ŠPONER Jiří

  Article in Periodical

  Physical Chemistry Chemical Physics, year: 2016, volume: 18, edition: 30, DOI

• Synergy between NMR measurements and MD simulations of protein/RNA complexes: application to the RRMs, the most common RNA recognition motifs

  KREPL Miroslav CLERY Antoine BLATTER Markus ALLAIN Frederic H. T. ŠPONER Jiří

  Article in Periodical

  Nucleic Acids Research, year: 2016, volume: 44, edition: 13, DOI

• TiO2-catalyzed synthesis of sugars from formaldehyde in extraterrestrial impacts on the early Earth

  CIVIŠ Svatopluk SZABLA Rafal Kazimierz SZYJA Bartłomiej M. SMYKOWSKI Daniel IVANEK Ondřej KNÍŽEK Antonín KUBELÍK Petr ŠPONER Jiří FERUS Martin ŠPONEROVÁ Judit

  Article in Periodical

  Scientific Reports, year: 2016, volume: 6, edition: March, DOI

• Ultrafast excited-state dynamics of isocytosine

  SZABLA Rafal Kazimierz GORA Robert W. ŠPONER Jiří

  Article in Periodical

  Physical Chemistry Chemical Physics, year: 2016, volume: 18, edition: 30, DOI

2015

• A G-quadruplex-binding compound showing anti-tumour activity in an in vivo model for pancreatic cancer

  OHNMACHT Stephan A. MARCHETTI Chiara GUNARATNAM Mekala BESSER Rachael J. HAIDER Shozeb M. DI VITA Gloria LOWE Helen L. MELLINAS-GOMEZ Maria DIOCOU Seckou ROBSON Mathew ŠPONER Jiří ISLAM Barira PEDLEY R. Barbara HARTLEY John A. NEIDLE Stephen

  Article in Periodical

  Scientific Reports, year: 2015, volume: 5, edition: june, DOI

• Can We Execute Stable Microsecond-Scale Atomistic Simulations of Protein-RNA Complexes?

  KREPL Miroslav HAVRILA Marek STADLBAUER Petr BANÁŠ Pavel OTYEPKA Michal PASULKA Josef ŠTEFL Richard ŠPONER Jiří

  Article in Periodical

  Journal of Chemical Theory and Computation, year: 2015, volume: 11, edition: 3, DOI

• Conformational dynamics of bacterial and human cytoplasmic models of the ribosomal A-site

  PANECKA Joanna ŠPONER Jiří TRYLSKA Joanna

  Article in Periodical

  Biochimie, year: 2015, volume: 112, edition: May, DOI