Ing. Pavel Jedlička, Ph.D.

2025

• Factors determining chromosomal localization of transposable elements in plants

  KEJNOVSKÝ Eduard JEDLIČKA Pavel LEXA Matej KUBÁT Zdeněk

  Peer-reviewed scientific article

  PLANT BIOLOGY, year: 2025, volume: 27, edition: 6, DOI

• NOWHERE TO HIDE: COMPARING LTR RETROTRANSPOSON DYNAMICS IN HOLOCENTRIC CYPERIDS AND MONOCENTRIC GRASSES

  PANDA Klára KRÁTKÁ Marie ŠMERDA Jakub JEDLIČKA Pavel KEJNOVSKÝ Eduard BUREŠ Petr ZEDEK František

  Conference abstract

  Year: 2025, type: Conference abstract

2024

• Insights into the Evolution of Centromere from Holocentric Luzula sylvatica (Juncaceae)

  KRÁTKÁ Marie MATA-SUCRE Yennifer JEDLIČKA Pavel KEJNOVSKÝ Eduard MARQUES André

  Conference abstract

  Year: 2024, type: Conference abstract

2023

• TE-greedy-nester: a tool for reconstruction of transposable elements in plant genomes

  JEDLIČKA Pavel VANÁT Ivan LEXA Matej KRÁTKÁ Marie KEJNOVSKÝ Eduard

  Paper in proceedings

  Workshop on Bioinformatics and Computational Biology (WBCB 2023), year: 2023

2022

• HiC-TE: a computational pipeline for Hi-C data analysis to study the role of repeat family interactions in the genome 3D organization

  LEXA Matej ČECHOVÁ Monika NGUYEN Son Hoang JEDLIČKA Pavel TOKAN Viktor KUBÁT Zdeněk HOBZA Roman KEJNOVSKÝ Eduard

  Peer-reviewed scientific article

  BIOINFORMATICS, year: 2022, volume: 38, edition: 16, DOI

• LTR retrotransposons in holocentric plants from the Cyperaceae and Juncaceae families

  KRÁTKÁ Marie JEDLIČKA Pavel KUBÁT Zdeněk TOKAN Viktor ŠMERDA Jakub BUREŠ Petr KEJNOVSKÝ Eduard

  Conference abstract

  Year: 2022, type: Conference abstract

2019

• Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico study

  JEDLIČKA Pavel LEXA Matej VANÁT Ivan KEJNOVSKÝ Eduard HOBZA Roman

  Peer-reviewed scientific article

  Mobile DNA, year: 2019, volume: 10, edition: 1, DOI